Tuesday, June 12, 2007

Rising Stars

I've made some research finding out the genes that had more importance according to published articles in the last years. The findings are reported in these pages http://code.google.com/p/genequad/wiki/RisingStars and http://code.google.com/p/genequad/wiki/DetailsRisingStars

On the other hand, the ones that had less importance are also reported at http://code.google.com/p/genequad/wiki/ShowStoppers

Monday, June 11, 2007

Importing pubMed database with a ruby script using bioruby

If you desire to import pubMed database, a useful library for ruby may be used: bioruby. This post http://code.google.com/p/genequad/wiki/ImportingPubMed shows how to do that.

Zipf's Law in geneRIF

This post http://code.google.com/p/genequad/wiki/ZipfsLaw shows a study about Zipf's law in geneRIF.

Importing geneRIF database to sqlite3

Ok, if someone wants to import the txt file from NCBI to sqlite3, http://code.google.com/p/genequad/wiki/ImportingGenerif tells you how to do that. A procedure just like this may be used to import to other databases as well. Congrats NCBI for geneRIF!